Vadim Gladyshev's lab
Roderic Guigo's lab
Selenoprotein prediction server
initial
Selenoprotein prediction
Seblastian
SECIS prediction
SECISearch3
Search for:
known selenoproteins
known and new selenoproteins
upstream sequence length:
blastx evalue threshold:
maximum SECIS distance:
output all SECIS elements
Note: as SECISearch3 is run as a first step, all options on the left are also considered for Seblastian.
search also complementary strand
filter improbable structures
generate SECIS images (dpi:
)
predict SECIS type
SECISearch3 method:
Infernal
score threshold:
Covels
score threshold:
Original SECISearch
pattern:
Strict
Default
Loose
Loosest
Upload your sequence file:
or paste it here:
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